All files / extensions/cornerstone/src/utils/measurementServiceMappings ArrowAnnotate.ts

1.63% Statements 1/61
0% Branches 0/19
0% Functions 0/9
1.72% Lines 1/58

Press n or j to go to the next uncovered block, b, p or k for the previous block.

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177          34x                                                                                                                                                                                                                                                                                                                                                      
import SUPPORTED_TOOLS from './constants/supportedTools';
import { getIsLocked } from './utils/getIsLocked';
import getSOPInstanceAttributes from './utils/getSOPInstanceAttributes';
import { getIsVisible } from './utils/getIsVisible';
 
const ArrowAnnotate = {
  toAnnotation: measurement => {},
 
  /**
   * Maps cornerstone annotation event data to measurement service format.
   *
   * @param {Object} cornerstone Cornerstone event data
   * @return {Measurement} Measurement instance
   */
  toMeasurement: (
    csToolsEventDetail,
    displaySetService,
    cornerstoneViewportService,
    getValueTypeFromToolType,
    customizationService
  ) => {
    const { annotation } = csToolsEventDetail;
    const { metadata, data, annotationUID } = annotation;
 
    const isLocked = getIsLocked(annotationUID);
    const isVisible = getIsVisible(annotationUID);
    Iif (!metadata || !data) {
      console.warn('Length tool: Missing metadata or data');
      return null;
    }
 
    const { toolName, referencedImageId, FrameOfReferenceUID } = metadata;
    const validToolType = SUPPORTED_TOOLS.includes(toolName);
 
    Iif (!validToolType) {
      throw new Error('Tool not supported');
    }
 
    const { SOPInstanceUID, SeriesInstanceUID, StudyInstanceUID } = getSOPInstanceAttributes(
      referencedImageId,
      displaySetService,
      annotation
    );
 
    let displaySet;
 
    if (SOPInstanceUID) {
      displaySet = displaySetService.getDisplaySetForSOPInstanceUID(
        SOPInstanceUID,
        SeriesInstanceUID
      );
    } else {
      displaySet = displaySetService.getDisplaySetsForSeries(SeriesInstanceUID)[0];
    }
 
    const { points, textBox } = data.handles;
 
    const mappedAnnotations = getMappedAnnotations(annotation, displaySetService);
 
    const displayText = getDisplayText(mappedAnnotations, displaySet);
    const getReport = () => _getReport(mappedAnnotations, points, FrameOfReferenceUID);
 
    return {
      uid: annotationUID,
      SOPInstanceUID,
      FrameOfReferenceUID,
      points,
      textBox,
      isLocked,
      isVisible,
      metadata,
      referenceSeriesUID: SeriesInstanceUID,
      referenceStudyUID: StudyInstanceUID,
      referencedImageId,
      frameNumber: mappedAnnotations[0]?.frameNumber || 1,
      toolName: metadata.toolName,
      displaySetInstanceUID: displaySet.displaySetInstanceUID,
      label: data.text,
      displayText: displayText,
      data: data.cachedStats,
      type: getValueTypeFromToolType(toolName),
      getReport,
    };
  },
};
 
function getMappedAnnotations(annotation, displaySetService) {
  const { metadata, data } = annotation;
  const { text } = data;
  const { referencedImageId } = metadata;
 
  const annotations = [];
 
  const { SOPInstanceUID, SeriesInstanceUID, frameNumber } = getSOPInstanceAttributes(
    referencedImageId,
    displaySetService,
    annotation
  );
 
  const displaySet = displaySetService.getDisplaySetsForSeries(SeriesInstanceUID)[0];
 
  const { SeriesNumber } = displaySet;
 
  annotations.push({
    SeriesInstanceUID,
    SOPInstanceUID,
    SeriesNumber,
    frameNumber,
    text,
  });
 
  return annotations;
}
 
function getDisplayText(mappedAnnotations, displaySet) {
  const displayText = {
    primary: [],
    secondary: [],
  };
 
  Iif (!mappedAnnotations || !mappedAnnotations.length) {
    return displayText;
  }
 
  const { SeriesNumber, SOPInstanceUID, frameNumber, text } = mappedAnnotations[0];
 
  const instance = displaySet.instances.find(image => image.SOPInstanceUID === SOPInstanceUID);
 
  let InstanceNumber;
  Iif (instance) {
    InstanceNumber = instance.InstanceNumber;
  }
 
  const instanceText = InstanceNumber ? ` I: ${InstanceNumber}` : '';
  const frameText = displaySet.isMultiFrame ? ` F: ${frameNumber}` : '';
 
  // Add the annotation text to the primary array
  Iif (text) {
    displayText.primary.push(text);
  }
 
  // Add the series information to the secondary array
  displayText.secondary.push(`S: ${SeriesNumber}${instanceText}${frameText}`);
 
  return displayText;
}
 
function _getReport(mappedAnnotations, points, FrameOfReferenceUID) {
  const columns = [];
  const values = [];
 
  columns.push('AnnotationType');
  values.push('Cornerstone:ArrowAnnote');
 
  mappedAnnotations.forEach(annotation => {
    const { text } = annotation;
    columns.push(`Text`);
    values.push(text);
  });
 
  Iif (FrameOfReferenceUID) {
    columns.push('FrameOfReferenceUID');
    values.push(FrameOfReferenceUID);
  }
 
  Iif (points) {
    columns.push('points');
    values.push(points.map(p => p.join(' ')).join(';'));
  }
 
  return {
    columns,
    values,
  };
}
export default ArrowAnnotate;