All files / extensions/cornerstone/src/utils segmentationHandlers.ts

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import * as cornerstoneTools from '@cornerstonejs/tools';
import { updateSegmentationStats } from './updateSegmentationStats';
import { useSelectedSegmentationsForViewportStore } from '../stores';
import { SegmentationRepresentations } from '@cornerstonejs/tools/enums';
 
/**
 * Sets up the handler for segmentation data modification events
 */
export function setupSegmentationDataModifiedHandler({
  segmentationService,
  customizationService,
  commandsManager,
}) {
  // A flag to indicate if the event is unsubscribed to. This is important because
  // the debounced callback does an await and in that period of time the event may have
  // been unsubscribed.
  let isUnsubscribed = false;
  const { unsubscribe: debouncedUnsubscribe } = segmentationService.subscribeDebounced(
    segmentationService.EVENTS.SEGMENTATION_DATA_MODIFIED,
    async ({ segmentationId }) => {
      const disableUpdateSegmentationStats = customizationService.getCustomization(
        'panelSegmentation.disableUpdateSegmentationStats'
      );
 
      const segmentation = segmentationService.getSegmentation(segmentationId);
 
      Iif (!segmentation || disableUpdateSegmentationStats) {
        return;
      }
 
      const readableText = customizationService.getCustomization('panelSegmentation.readableText');
 
      // Check for segments with bidirectional measurements and update them
      const segmentIndices = Object.keys(segmentation.segments)
        .map(index => parseInt(index))
        .filter(index => index > 0);
 
      for (const segmentIndex of segmentIndices) {
        const segment = segmentation.segments[segmentIndex];
        Iif (segment?.cachedStats?.namedStats?.bidirectional) {
          // Run the command to update the bidirectional measurement
          commandsManager.runCommand('runSegmentBidirectional', {
            segmentationId,
            segmentIndex,
          });
        }
      }
 
      const updatedSegmentation = await updateSegmentationStats({
        segmentation,
        segmentationId,
        readableText,
      });
 
      if (!isUnsubscribed && updatedSegmentation) {
        const existingSegmentation = segmentationService.getSegmentation(segmentationId);
 
        if (existingSegmentation) {
          segmentationService.addOrUpdateSegmentation({
            segmentationId,
            segments: updatedSegmentation.segments,
          });
        }
      }
    },
    1000
  );
 
  const unsubscribe = () => {
    isUnsubscribed = true;
    debouncedUnsubscribe();
  };
  return { unsubscribe };
}
 
/**
 * Sets up the handler for segmentation modification events
 */
export function setupSegmentationModifiedHandler({ segmentationService }) {
  const { unsubscribe } = segmentationService.subscribe(
    segmentationService.EVENTS.SEGMENTATION_MODIFIED,
    async ({ segmentationId }) => {
      const segmentation = segmentationService.getSegmentation(segmentationId);
 
      Iif (!segmentation) {
        return;
      }
 
      const annotationState = cornerstoneTools.annotation.state.getAllAnnotations();
      const bidirectionalAnnotations = annotationState.filter(
        annotation =>
          annotation.metadata.toolName === cornerstoneTools.SegmentBidirectionalTool.toolName
      );
 
      const segmentIndices = Object.keys(segmentation.segments)
        .map(index => parseInt(index))
        .filter(index => index > 0);
 
      // check if there is a bidirectional data that exists but the segment
      // does not exists anymore we need to remove the bidirectional data
      const bidirectionalAnnotationsToRemove = bidirectionalAnnotations.filter(
        annotation =>
          annotation.metadata.segmentationId === segmentationId &&
          !segmentIndices.includes(annotation.metadata.segmentIndex)
      );
 
      const toRemoveUIDs = bidirectionalAnnotationsToRemove.map(
        annotation => annotation.annotationUID
      );
 
      toRemoveUIDs.forEach(uid => {
        cornerstoneTools.annotation.state.removeAnnotation(uid);
      });
    }
  );
 
  return { unsubscribe };
}
 
/**
 * Sets up auto tab switching for when the first segmentation is added into the viewer.
 */
export function setUpSelectedSegmentationsForViewportHandler({ segmentationService }) {
  const selectedSegmentationsForViewportEvents = [
    segmentationService.EVENTS.SEGMENTATION_MODIFIED,
    segmentationService.EVENTS.SEGMENTATION_REPRESENTATION_MODIFIED,
  ];
 
  const unsubscribeSelectedSegmentationsForViewportEvents = selectedSegmentationsForViewportEvents
    .map(eventName =>
      segmentationService.subscribe(eventName, event => {
        const { viewportId } = event;
 
        if (!viewportId) {
          return;
        }
 
        const { selectedSegmentationsForViewport, setSelectedSegmentationsForViewport } =
          useSelectedSegmentationsForViewportStore.getState();
 
        const representations = segmentationService.getSegmentationRepresentations(viewportId);
 
        const activeRepresentation = representations.find(representation => representation.active);
 
        const typeToSegmentationIdMap =
          selectedSegmentationsForViewport[viewportId] ??
          new Map<SegmentationRepresentations, string>();
 
        if (activeRepresentation) {
          typeToSegmentationIdMap.set(
            activeRepresentation.type,
            activeRepresentation.segmentationId
          );
        } else {
          typeToSegmentationIdMap.clear();
        }
 
        setSelectedSegmentationsForViewport(viewportId, typeToSegmentationIdMap);
      })
    )
    .map(subscription => subscription.unsubscribe);
 
  return { unsubscribeSelectedSegmentationsForViewportEvents };
}